Thursday, October 15, 2009

QSUB Tips

1, transfer variable
use -V, you can transfer all variables to the job, and use -v, you can specify a variable to transfer:
qsub -V -cwd -l mem=3G,time=72:00:00 -o $qoutF -e $qerrF $qsubF
qsub -cwd -v sparks=$sparksDir -o $qoutF -e $qerrF $qsubF

2, big jobs, for titan@lab
qrsh -l mem=30G,time=24:: -now n

3, binds to a specified queue/node
qrsh -q all.q@gaianode-8-85.local -now n


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